Artificial Intelligence in Drug Discovery-Editor: Nathan Brown

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书籍格式: PDF
isbn: 978-1-83916-054-7
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Artificial Intelligence in Drug Discovery-Editor: Nathan Brown

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Publication details

https://doi.org/10.1039/9781788016841


Print publication date

12 Nov 2020

Copyright year

2021

Print ISBN

978-1-78801-547-9

PDF eISBN

978-1-78801-684-1

ePub eISBN

978-1-83916-054-7


About this book

Following significant advances in deep learning and related areas interest in artificial intelligence (AI) has rapidly grown. In particular, the application of AI in drug discovery provides an opportunity to tackle challenges that previously have been difficult to solve, such as predicting properties, designing molecules and optimising synthetic routes. Artificial Intelligence in Drug Discovery aims to introduce the reader to AI and machine learning tools and techniques, and to outline specific challenges including designing new molecular structures, synthesis planning and simulation. Providing a wealth of information from leading experts in the field this book is ideal for students, postgraduates and established researchers in both industry and academia.

 Preliminary content


Front Matter

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Pages 1 - 6


Preface

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Pages 7 - 8


Contents

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Pages 9 - 17

Chapter 1

Introduction

Nathan Brown

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Pages 1 - 6

Chapter 2

The History of Artificial Intelligence and Chemistry

Nathan Brown

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Pages 7 - 14

Chapter 3

Chemical Topic Modeling – An Unsupervised Approach Originating from Text-mining to Organize Chemical Data

Nadine Schneider, Nikolas Fechner, Nikolaus Stiefl and Gregory A. Landrum

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Pages 15 - 44

Chapter 4

Deep Learning and Chemical Data

Colin Batchelor, Peter Corbett, Aileen Day, Jeff White and John Boyle

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Pages 45 - 62

Chapter 5

Concepts and Applications of Conformal Prediction in Computational Drug Discovery

Isidro Cortés-Ciriano and Andreas Bender

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Pages 63 - 101

Chapter 6

Non-applicability Domain. The Benefits of Defining “I Don't Know” in Artificial Intelligence

Damjan Krstajic

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Pages 102 - 118

Chapter 7

Predicting Protein-ligand Binding Affinities

José Jiménez-Luna and Gianni De Fabritiis

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Pages 119 - 150

Chapter 8

Virtual Screening with Convolutional Neural Networks

Fergus Imrie, Anthony R. Bradley and Charlotte M. Deane

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Pages 151 - 183

Chapter 9

Machine Learning in the Area of Molecular Dynamics Simulations

Shuzhe Wang and Sereina Riniker

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Pages 184 - 214

Chapter 10

Compound Design Using Generative Neural Networks

T. Blaschke and J. Bajorath

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Pages 215 - 227

Chapter 11

Junction Tree Variational Autoencoder for Molecular Graph Generation

Wengong Jin, Regina Barzilay and Tommi Jaakkola

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Pages 228 - 249

Chapter 12

AI via Matched Molecular Pair Analysis

Ed Griffen, Alexander Dossetter and Andrew G. Leach

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Pages 250 - 271

Chapter 13

Molecular De Novo Design Through Deep Generative Models

Ola Engkvist, Josep Arús-Pous, Esben Jannik Bjerrum and Hongming Chen

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Pages 272 - 300

Chapter 14

Active Learning for Drug Discovery and Automated Data Curation

D. Reker

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Pages 301 - 326

Chapter 15

Data-driven Prediction of Organic Reaction Outcomes

Connor W. Coley

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Pages 327 - 348

Chapter 16

ChemOS: An Orchestration Software to Democratize Autonomous Discovery

Loïc M. Roch, Florian Häse and Alán Aspuru-Guzik

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Pages 349 - 388

Chapter 17

Summary and Outlook

Nathan Brown

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Pages 389 - 393

Subject Index

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Pages 394 - 405



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